| 261 |
Morgounova, E, Q Shao, B Hackel, DD Thomas and S Ashkenazi. 2013. Photoacoustic lifetime contrast between methylene blue monomers and statically quenched dimers as a model for dual-labeled activatable probes. J Biomed Opt in press. |
| 260 |
Muretta, JM, KJ Petersen, and DD Thomas. 2013.Direct real-time detection of the actin-activated power stroke within the myosin catalytic domain. Proc Natl Acad Sci USA 110:7211–7216. |
| 259 |
Prochniewicz, E, PG Guhathakurta and DD Thomas. 2013. Structural dynamics of actin during active interaction with myosin is determined by the essential light chain isoform. Biochemistry 52:1622−1630. |
| 258. |
Moen, RJ, DD Thomas, and JC Klein. 2013. Conformationally trapping the actin-binding cleft of myosin with a bifunctional spin label. J Biol Chem 288:3016–3024. |
| 257. |
Cornea, RL, SJ Gruber, EL Lockamy, JM Muretta, D Jin, J Chen, R Dahl, T Bartfai, KM Zsebo, GD Gillispie, and DD Thomas. 2013. High-throughput FRET assay yields allosteric SERCA activators. J Biomol Screen 18:96-106. |
| 256. |
Colson, BA, IN Rybakova, E Prochniewicz, RL Moss, and DD Thomas. 2012. Cardiac myosin binding protein-C restricts intrafilament torsional dynamics of actin in a phosphorylation-dependent manner. Proc Nat Acad Sci USA 109:20437-42. |
| 255. |
Autry, JM, JE Rubin, B Svensson, J Li, and DD Thomas. 2012. Nucleotide activation of the Ca-ATPase. J Biol Chem 287 46:39070–39082. |
| 254. |
James, Z., JE McCaffrey, KD Torgersen, CB Karim, and DD Thomas. 2012. Protein-protein interactions in calcium transport regulation probed by saturation transfer electron paramagnetic resonance. Biophys J 103:1370-1378. |
| 253. |
Colson, BA, SJ Gruber, and DD Thomas. 2012. Structural dynamics of muscle protein phosphorylation. J Muscle Res Cell Motil e-published ahead of print. |
| 252. |
Hou, Z, S Hu, DJ Blackwell, TD Miller, DD Thomas, and SL Robia. 2012. Two-color calcium pump reveals closure of the cytoplasmic headpiece with calcium binding. PLoS One 7:e40369. |
| 251. |
Guhathakurta, P, E Prochniewicz, JM Muretta, MA Titus, and David D. Thomas. 2012. Allosteric communication in Dyctiostelium myosin II. J Muscle Res Cell Motil 33:305-12. |
| 250. |
Valley, CC, JD Perlmutter, AR Braun, AK Lewis, CB Karim, DD Thomas, JR Brody, and JN Sachs. 2012.
Tumor necrosis factor-related apoptosis-inducing ligand (TRAIL) induces Death Receptor 5 networks that are highly organized. J Biol Chem 87:21265-21278. |
| 249. |
Lin, AY, E Prochniewicz, DM Henderson,, B Li, JM Ervasti, and DD Thomas. 2012. Impacts of dystrophin and utrophin domains on actin structural dynamics: implications for therapeutic design. J Mol Biol 420:87-98. |
| 248. |
Gruber, SJ, S Haydon, and DD Thomas. 2012. Phospholamban mutants compete with wild type for SERCA binding in HEK Cells. Biochem Biophys Res Commun 420:236-240. |
| 247. |
Li, J, ZM James, X Dong, CB Karim, and DD Thomas. 2012. Structural and functional dynamics of an integral membrane protein complex modulated by lipid headgroup charge. J Mol Biol 418:379-389. |
| 246. |
Ablorh, NA, T Miller, F Nitu, SJ Gruber, CB Karim, and DD Thomas. 2011. Accurate quantitation of phospholamban phosphorylation by immunoblot. Anal Biochem 425:68-75. |
| 245. |
Henderson, DM, AY Lin, DD Thomas, and JM Ervasti. 2012. The carboxy-terminal third of dystrophin enhances actin binding activity. J Mol Biol 416:414–424. |
| 244. |
Mello, R, and DD Thomas. 2012. Three distinct actin-attached structural states of myosin in muscle fibers. Biophys J 102:1088–1096. |
| 243. |
Karon, BS, C van Buskirk, E Jaben, JD Hoyer, and DD Thomas. 2012. Temporal sequence of major biochemical events during blood bank storage of packed red blood cells. Blood Transfusion published online. |
| 242. |
Thomas, DD, JM Muretta, BA Colson, R Mello, and D Kast. 2012. Spectroscopic probes of muscle proteins. In Comprehensive Biophysics Editor-in-Chief HE Egelman, Amsterdam, Elsevier 226-250. |
| 241. |
Klein, JC, RJ Moen, EA Smith, MA Titus, and DD Thomas. 2011. Structural and functional impact of site-directed methionine oxidation in myosin. Biochemistry 50:10318–10327. |
| 240. |
Espinoza-Fonseca, LM, and DD Thomas. 2011. Atomic-level characterization of the activation mechanism of SERCA by calcium. PLoS One 6:e26936. |
| 239. |
Prochniewicz, E, A Pierre, BR McCullough, HF Chin, W Cao, LP Saunders, DD Thomas, and EM De La Cruz. 2011. Actin filament dynamics in the actomyosin VI complex is regulated allosterically by calcium-calmodulin light chain. J Mol Biol 413:584-92. |
| 238. |
Moen, RJ, DO Johnsrud, DD Thomas and MA Titus. 2011. Characterization of a Myosin VII MyTH/FERM domain. J Mol Biol 413:17-23. |
| 237. |
Autry, JM, JE Rubin, SD Pietrini, DL Winters, SL Robia, and DD Thomas. 2011. Oligomeric interactions of sarcolipin and the Ca-ATPase. 2011. J Biol Chem 286:31697-31706. |
| 236. |
Lin, AY, E Prochniewicz, ZM James, B Svensson, and DD Thomas. 2011. Large-scale opening of utrophin’s tandem CH domains upon actin binding by an induced-fit mechanism. Proc Nat Acad Sci USA 108:12729–12733.
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| 235. |
Wilson, DJ, C. Shi, BP Duckworth, JM Muretta, U Manjunatha, YY Sham, DD Thomas and CC Aldrich. 2011. A continuous fluorescence displacement assay for BioA, an enzyme involved in biotin biosynthesis. Anal Biochem 416:27-38. |
| 234. |
Lockamy, EL, RL Cornea, CB Karim, and DD Thomas. 2011. Functional and physical competition between phospholamban and its mutants provides insight into the molecular mechanism of gene therapy for heart failure. Biochem Biophys Res Commun 408:388–392. |
| 233. |
Gustavsson, M, NJ Traaseth, CB Karim, EL Lockamy, DD Thomas, and G Veglia. 2011. Lipid-mediated folding/unfolding of phospholamban as a regulatory mechanism for the sarcoplasmic reticulum calcium ATPase. J Mol Biol 408:755–765. |
| 232. |
Nesmelov, Y.E., R. Agafonov, I.V. Negrashov, S. Blakely, M.A. Titus, and D.D. Thomas. 2011. Structural kinetics of myosin by transient time-resolved FRET. Proc Nat Acad Sci USA 108:1891–1896. |
| 231. |
Muretta, JM, A Kyrychenko, AS Ladokhin, D Kast, GD Gillispie, and DD Thomas. 2010. High -performance time-resolved fluorescence by direct waveform recording. Rev Sci Instrum 81:103101 (1-8). |
| 230. |
Nesmelov, YE and DD Thomas. 2010. Protein structural dynamics revealed by site-directed spin labeling and multifrequency EPR. Biophys Rev 2:91-99. |
| 229. |
Cornea, RL, FR Nitu, M Samso, DD Thomas and BR Fruen. 2010. Mapping the ryanodine receptor (RyR) FK506-binding protein (FKBP) subunit using fluorescence resonance energy transfer (FRET). J Biol Chem 285:19219-19226. |
| 228. |
Kast, DJ, LM Espinoza-Fonseca, C Yi and DD Thomas. 2010. Phosphorylation-induced structural changes in smooth muscle myosin regulatory light chain. Proc Nat Acad Sci USA 107:8207-8212. |
| 227. |
Prochniewicz, E, HF Chin, DE Hannemann, AO Olivares, DD Thomas, and EM De La Cruz. 2009. Myosin isoform determines the conformational dynamics and cooperativity of actin filaments in the strongly bound actomyosin complex. J Mol Biol 396:501-509. |
| 226. |
Guidelli, R, L Becucci, CB Karim, DD Thomas, and G Veglia. 2009. The role of sarcolipin and ATP in the transport of phosphate ion into the sarcoplasmic reticulum. Biophys J 97:2693-2699. |
| 225. |
Agafonov R, IV Negrashov, Y Tkachev, S Blakely, MA Titus, DD Thomas, and YE Nesmelov. 2009. Structural dynamics of the myosin relay helix by time-resolved EPR and FRET. Proc Nat Acad Sci USA 106:21625-21630. |
| 224. |
Hermanson, D, SN Addo, AA Bajer, JS Marchant, SJK Das, B Srinivasan, F Al-Mousa, F Michelangeli, DD Thomas, TW LeBien, and C Xing. 2009. Dual mechanisms of sHA 14-1 in inducing cell death through endoplasmic reticulum and mitochondria. Mol Pharmacol 76:667-78. |
| 223. |
Becucci, L, A Cembran, CB Karim, DD Thomas, R Guidelli, J Gao, and G Veglia. 2009. On the function of pentameric phospholamban: ion channel or storage form? Biophys J 96:L60-62. |
| 222. |
Balog, EM, EL Lockamy, DD Thomas, and DA Ferrington. 2009. Site-specific methionine oxidation initiates calmodulin degradation by the 20S proteasome. Biochemistry 48:3005-3016. |
| 221. |
Prochniewicz, E, DM Henderson, JM Ervasti and DD Thomas. 2009. Dystrophin and utrophin have distinct effects on the structural dynamics of actin. Proc Natl Acad Sci USA 106:7822-7827. |
| 220. |
Ablorh, NA, F Nitu, K Engebretsen, DD Thomas, and JS Holger. 2009. Insulin-dependent rescue from cardiogenic shock is not mediated by phospholamban phosphorylation. Clin Toxicol 47:296-302. |
| 219. |
Cornea, RL, F Nitu, SJ Gruber, K Kohler, M Satzer, DD Thomas, and BR Fruen. 2009. FRET-based mapping of calmodulin bound to the RyR1 Ca2+ release channel. Proc Natl Acad Sci USA 106:6128-6133. |
| 218. |
Karon, BS, JD Hoyer, JR Stubbs, and DD Thomas. 2009. Changes in Band 3 oligomeric state precede cell membrane phospholipid loss during blood bank storage of red blood cells. Transfusion 14:1435-1442. |
| 217. |
Thomas, DD, D Kast, and V Korman. 2009. Site-directed spectroscopic probes of actomyosin structural dynamics. Annu Rev Biophys 38:347–369. |
| 216. |
Mahaney, JE, DD Thomas, IK Farrance, and JP Froehlich. 2008. Intermolecular interactions in the mechanism of skeletal muscle sarcoplasmic reticulum Ca(2+)-ATPase (SERCA1): evidence for a triprotomer. Biochemistry 47:13711-13725. |
| 215. |
Prochniewicz, E, D Spakowicz, and DD Thomas. 2008. Changes in actin structural transitions associated with oxidative inhibition of muscle contraction. Biochemistry 47:11811-11817. |
| 214. |
Espinoza-Fonseca, LM, D Kast, and DD Thomas. 2008. Thermodynamic and structural basis of phosphorylation-induced disorder-to-order transition in the regulatory light chain of smooth muscle myosin. J Am Chem Soc 130:12208-12209. |
| 213. |
Thompson, AR, N Naber, C Wilson, R Cooke, and DD Thomas. 2008. Structural dynamics of the actomyosin complex probed by a bifunctional spin label that cross-links SH1 and SH2. Biophys J 95:5238-5246. |
| 212. |
Klein, JC, AR Burr, B Svensson, DJ Kennedy, J Allingham, MA Titus, I Rayment, and DD Thomas. 2008. Actin-binding cleft closure in myosin II probed by site-directed spin labeling and pulsed EPR. Proc Natl Acad Sci USA 105:12867-12872. |
| 211. |
Agafonov, RV, YE Nesmelov, MA Titus, and DD Thomas. 2008. Muscle and nonmuscle myosins probed by a spin label at equivalent sites in the force-generating domain. Proc Natl Acad Sci USA 105:13397-13402. |
| 210. |
Nesmelov, YE, RV Agafonov, AR Burr, RT Weber, and DD Thomas. 2008. Structure and dynamics of the force-generating domain of myosin probed by multifrequency electron paramagnetic resonance. Biophys J 95:247-256. |
| 209. |
Winters, DL, JM Autry, B Svensson, and DD Thomas. 2008. Interdomain fluorescence resonance energy transfer in SERCA probed by cyan fluorescent protein fused to the actuator domain. Biochemistry 47:4246-4256. |
| 208. |
Prochniewicz, E, DA Lowe, DJ Spakowicz, L. Higgins, K. O'Conor, LV Thompson, DA Ferrington, and DD Thomas. 2008. Functional, structural, and chemical changes in myosin associated with hydrogen peroxide treatment of skeletal muscle fibers. Am J Physiol Cell Physiol 294:C613-626. |
| 207. |
Surek, JT, and DD Thomas. 2008. A paramagnetic molecular voltmeter. J Magn Reson 190:7-25. |
| 206. |
Thomas, DD 2007. A passion for wrestling. EPR Newsletter 17:6-7. |
| 205. |
Robia, SL, KS Campbell, EM Kelly, Z Hou, DL Winters, and DD Thomas. 2007. Förster transfer recovery reveals that phospholamban exchanges slowly from pentamers but rapidly from the SERCA regulatory complex. Circ Res 101:1123-1129. |
| 204. |
Ha, KN, NJ Traaseth, R Verardi, J Zamoon, A Cembran, CB Karim, DD Thomas, and G Veglia. 2007. Controlling the inhibition of the sarcoplasmic Ca2+-ATPase by tuning phospholamban structural dynamics. J Biol Chem 282:37205-37214. |
| 203. |
Galdeen, SA, S Stephens, DD Thomas, and MA Titus. 2007. Talin influences the dynamics of the myosin VII-membrane interaction. Mol Biol Cell 18:4074-4084. |
| 202. |
Traaseth, NJ, R Verardi, KD Torgersen, CB Karim, DD Thomas, and G Veglia. 2007. Spectroscopic validation of the pentameric structure of phospholamban. Proc Natl Acad Sci USA 104:14676-14681. |
| 201. |
Prochniewicz, E, LV Thompson, and DD Thomas. 2007. Age-related decline in actomyosin structure and function. Exp Gerontol 42:931-938. |
| 200. |
Nesmelov, YE, CB Karim, L Song, PG Fajer, and DD Thomas. 2007. Rotational dynamics of phospholamban determined by multifrequency electron paramagnetic resonance. Biophys J 93:2805-2812. |
| 199. |
Guidelli, R, L Becucci, CB Karim, DD Thomas and G Veglia. 2007. An electrochemical investigation of sarcolipin reconstituted into a mercury-supported lipid bilayer. Biophys J 93:2678-2687. |
| 197. |
Espinoza-Fonseca, LM, D Kast, and DD Thomas. 2007. Molecular dynamics simulations reveal a disorder-to-order transition upon phosphorylation of smooth muscle myosin. Biophys J 93:2083-2090. |
| 196. |
Karim, CB, Z Zhang, and DD Thomas. 2007. Synthesis of TOAC spin-labeled proteins and reconstitution in lipid membranes. Nature Protocols 2:42-49. |
| 195. |
Zhang, Z., HA Remmer, DD Thomas, and CB Karim. 2007. Backbone dynamics determined by electron paramagnetic resonance to optimize solid-phase peptide synthesis of TOAC-labeled phospholamban. Biopolymers. 88:29-35. |
| 194. |
Lowe, DA, BO Williams, DD Thomas, and RW Grange. 2006. Molecular and cellular contractile dysfunction of dystrophic muscle from young mice. Muscle Nerve 34:92-100. |
| 193. |
Traaseth, NJ, DD Thomas, and G Veglia. 2006. Effects of Ser16 Phosphorylation on the Allosteric Transitions of Phospholamban/Ca(2+)-ATPase Complex. J Mol Biol 358:1041-1050. |
| 192. |
Karim, CB, Z Zhang, EC Howard, KD Torgersen, and DD Thomas. 2006. Phosphorylation-dependent Conformational Switch in Spin-labeled Phospholamban Bound to SERCA. J Mol Biol 358:1032-1040. |
| 191. |
Buffy, JJ, BA Buck-Koehntop, F Porcelli, NJ Traaseth, DD Thomas, and G Veglia. 2006. Defining the intramembrane binding mechanism of sarcolipin to calcium ATPase using solution NMR spectroscopy. J Mol Biol 358:420-429. |
| 190. |
Traverse, JH, YE Nesmelov, M Crampton, P Lindstrom, DD Thomas, and RJ Bache. 2006. Measurement of myocardial free radical production during exercise using EPR spectroscopy. Am J Physiol Heart Circ Physiol 290:H2453-2458. |
| 189. |
Zhang, J., BJ Wallar, CV Popescu, DB Renner, DD Thomas, and JD Lipscomb. 2006. Methane monooxygenase hydroxylase and B component interactions. Biochemistry 45:2913-2926. |
| 188. |
Nesmelov, YE, and DD Thomas. 2006. Multibore sample cell increases EPR sensitivity for aqueous samples. J Magn Reson 178:318-324. |
| 187. |
Prochniewicz, E, N Janson, DD Thomas, and EM De La Cruz. 2005. Cofilin increases the torsional flexibility and dynamics of actin filaments. J Mol Biol 353:990-1000. |
| 186. |
Korman, VL, SE Anderson, E Prochniewicz, MA Titus, and DD Thomas. 2006. Structural dynamics of the actin-myosin interface by site-directed spectroscopy. J Mol Biol 356:1107-1117. |
| 185. |
Balog, EM, LE Norton, DD Thomas, and BR Fruen. 2006. Role of calmodulin methionine residues in mediating productive association with cardiac ryanodine receptors. Am J Physiol Heart Circ Physiol. 290:H794-799. |
| 184. |
Prochniewicz, E, DD Thomas, and LV Thompson. 2005. Age-related decline in actomyosin function. J Gerontol A Biol Sci Med Sci 60:425-431. |
| 183. |
Paterlini, MG, and DD Thomas. 2005. The alpha-helical propensity of the cytoplasmic domain of phospholamban: a molecular dynamics simulation of the effect of phosphorylation and mutation. Biophys J 88:3243-3251. |
| 182. |
Robia, SL, NC Flohr, and DD Thomas. 2005. Phospholamban pentamer quaternary conformation determined by in-gel fluorescence anisotropy. Biochemistry 44:4302-4311. |
| 181. |
Zamoon, J, F Nitu, CB Karim, DD Thomas, and G Veglia. 2005. Mapping the interaction surface of a membrane protein: Unveiling the conformational switch of phospholamban in calcium pump regulation. Proc Natl Acad Sci USA 102:4747-4752. |
| 180. |
Nelson, WD, SE Blakely, YE Nesmelov, and DD Thomas. 2005. Site-directed spin labeling reveals a conformational switch in the phosphorylation domain of smooth muscle myosin. Proc Natl Acad Sci USA 102:4000-4005. |
| 179. |
Fruen, BR, EM Balog, J Schafer, F Nitu, DD Thomas, and RL Cornea. 2005. Direct detection of calmodulin tuning by ryanodine receptor channel targets using a Ca(2+)-sensitive acrylodan-labeled calmodulin. Biochemistry 44:278-284. |
| 178. |
Karim, CB, TL Kirby, Z Zhang, Y Nesmelov, and DD Thomas. 2004. Phospholamban structural dynamics in lipid bilayers probed by a spin label rigidly coupled to the peptide backbone. Proc Natl Acad Sci USA 101:14437-14442. |
| 177. |
Mueller, B, M Zhao, IV Negrashov, R Bennett, and DD Thomas. 2004. SERCA structural dynamics induced by ATP and calcium. Biochemistry 43:12846-12854. |
| 176. |
Prochniewicz, E, TF Walseth, and DD Thomas. 2004. Structural dynamics of actin during active interaction with myosin: different effects of weakly and strongly bound myosin heads. Biochemistry 43:10642-10652. |
| 175. |
Metcalfe, EE, J Zamoon, DD Thomas, and G Veglia. 2004. 1H/15N Heteronuclear NMR spectroscopy shows four dynamic domains for phospholamban reconstituted in dodecylphosphocholine micelles. Biophys J 87:1205-1214. |
| 174. |
Mueller, B, CB Karim, IV Negrashov, H Kutchai, and DD Thomas. 2004. Direct detection of phospholamban and sarcoplasmic reticulum Ca-ATPase interaction in membranes using fluorescence resonance energy transfer. Biochemistry 43:8754-8765. |
| 173. |
Kirby, TL, CB Karim, and DD Thomas. 2004. Electron paramagnetic resonance reveals a large-scale conformational change in the cytoplasmic domain of phospholamban upon binding to the sarcoplasmic reticulum Ca-ATPase. Biochemistry 43:5842-5852. |
| 172. |
Mahaney, JE, DD Thomas, and JP Froehlich. 2004. The time-dependent distribution of phosphorylated intermediates in native sarcoplasmic reticulum Ca2+-ATPase from skeletal muscle is not compatible with a linear kinetic model. Biochemistry 43:4400-4416. |
| 171. |
Nesmelov, YE, A Gopinath, and DD Thomas. 2004. Aqueous sample in an EPR cavity: sensitivity considerations. J Magn Reson 167:138-146. |
| 170. |
Lowe, DA, GL Warren, LM Snow, LV Thompson, and DD Thomas. 2004. Muscle activity and aging affect myosin structural distribution and force generation in rat fibers. J Appl Physiol. 96:498-506. |
| 169. |
Zamoon, J, A Mascioni, DD Thomas, and G Veglia. 2003. NMR solution structure and topological orientation of monomeric phospholamban in dodecylphosphocholine micelles. Biophys J 85:2589-2598. |
| 168. |
LaConte, LE, JE Baker, and DD Thomas. 2003. Transient kinetics and mechanics of myosin's force-generating rotation in muscle: resolution of millisecond rotational transitions in the spin-labeled myosin light-chain domain. Biochemistry 42:9797-9803. |
| 167. |
Buck, B, J Zamoon, TL Kirby, TM DeSilva, CB Karim, DD Thomas, and G Veglia. 2003. Overexpression, purification, and characterization of recombinant Ca-ATPase regulators for high-resolution solution and solid-state NMR studies. Protein Expr Purif. 30:253-261. |
| 166. |
Reddy, LG, RL Cornea, DL Winters, E McKenna, and DD Thomas. 2003. Defining the molecular components of calcium transport regulation in a reconstituted membrane system. Biochemistry 42:4585-4592. |
| 165. |
Balog, EM, LE Norton, RA Bloomquist, RL Cornea, DJ Black, CF Louis, DD Thomas, and BR Fruen. 2003. Calmodulin oxidation and methionine to glutamine substitutions reveal methionine residues critical for functional interaction with ryanodine receptor-1. J Biol Chem 278:15615-15621. |
| 164. |
Lockwood, NA, RS Tu, Z Zhang, MV Tirrell, DD Thomas, and CB Karim. 2003. Structure and function of integral membrane protein domains resolved by peptide-amphiphiles: application to phospholamban. Biopolymers. 69:283-292. |
| 163. |
Lidke, DS, and DD Thomas. 2002. Coordination of the two heads of myosin during muscle contraction. Proc Natl Acad Sci USA 99:14801-14806. |
| 162. |
Mascioni, A, CB Karim, J Zamoon, DD Thomas, and G Veglia. 2002. Solid-state NMR and rigid body molecular dynamics to determine domain orientations of monomeric phospholamban. J Am Chem Soc. 124:9392-9393. |
| 161. |
LaConte, LE, V Voelz, WD Nelson, M Enz, and DD Thomas. 2002. Molecular dynamics simulation of site-directed spin labeling: experimental validation in muscle fibers. Biophys J 83:1854-1866. |
| 160. |
Nocek, JM, SL Hatch, JL Seifert, GW Hunter, DD Thomas, and BM Hoffman. 2002. Interprotein electron transfer in a confined space: uncoupling protein dynamics from electron transfer by sol-gel encapsulation. J Am Chem Soc. 124:9404-9411. |
| 159. |
Lowe, DA, DD Thomas, and LV Thompson. 2002. Force generation, but not myosin ATPase activity, declines with age in rat muscle fibers. Am J Physiol Cell Physiol. 283:C187-192. |
| 158. |
Mascioni, A, CB Karim, G Barany, DD Thomas, and G Veglia. 2002. Structure and orientation of sarcolipin in lipid environments. Biochemistry 41:475-482. |
| 157. |
Thomas, DD, E Prochniewicz, and O Roopnarine. 2002. Changes in actin and myosin structural dynamics due to their weak and strong interactions. Results and Problems in Cell Differentiation 36:7-19. |
| 156. |
Thomas, DD, and CG dos Remedios, Eds. 2002. Molecular interactions of actin. Actin-myosin interaction and actin-based regulation. Results and Problems in Cell Differentiation, Springer Verlag. |
| 155. |
dos Remedios, CG, and DD Thomas, Eds. 2001. Molecular interactions of actin. Actin structure and actin-binding proteins. Results and Problems in Cell Differentiation, Springer Verlag. |
| 154. |
Prochniewicz, E, and DD Thomas. 2001. Site-specific mutations in the myosin binding sites of actin affect structural transitions that control myosin binding. Biochemistry 40:13933-13940. |
| 153. |
Nesmelov, YE, JT Surek, and DD Thomas. 2001. Enhanced EPR sensitivity from a ferroelectric cavity insert. J Magn Reson 153:7-14. |
| 152. |
Karim, CB, MG Paterlini, LG Reddy, GW Hunter, G Barany, and DD Thomas. 2001. Role of cysteine residues in structural stability and function of a transmembrane helix bundle. J Biol Chem 276:38814-38819. |
| 151. |
Hellstern, S, S Pegoraro, CB Karim, A Lustig, DD Thomas, L Moroder, and J Engel. 2001. Sarcolipin, the shorter homologue of phospholamban, forms oligomeric structures in detergent micelles and in liposomes. J Biol Chem 276:30845-30852. |
| 150. |
Orlova, A, IN Rybakova, E Prochniewicz, DD Thomas, JM Ervasti, and EH Egelman. 2001. Binding of dystrophin's tandem calponin homology domain to F-actin is modulated by actin's structure. Biophys J 80:1926-1931. PMCID:1301381. |
| 149. |
Thompson, LV, DA Lowe, DA Ferrington, and DD Thomas. 2001. Electron paramagnetic resonance: a high-resolution tool for muscle physiology. Exerc Sport Sci Rev. 29:3-6. |
| 148. |
Lowe, DA, JT Surek, DD Thomas, and LV Thompson. 2001. Electron paramagnetic resonance reveals age-related myosin structural changes in rat skeletal muscle fibers. Am J Physiol Cell Physiol. 280:C540-547. |
| 147. |
Baker, JE, and DD Thomas. 2000. A thermodynamic muscle model and a chemical basis for A.V. Hill's muscle equation. J Muscle Res Cell Motil. 21:335-344. |
| 146. |
Karim, CB, CG Marquardt, JD Stamm, G Barany, and DD Thomas. 2000. Synthetic null-cysteine phospholamban analogue and the corresponding transmembrane domain inhibit the Ca-ATPase. Biochemistry 39:10892-10897. |
| 145. |
Baker, JE, and DD Thomas. 2000. Thermodynamics and kinetics of a molecular motor ensemble. Biophys J 79:1731-1736. |
| 144. |
Baker, JE, LE LaConte, DD Thomas, and I Brust-Mascher. 2000. Muscle chemistry and force. Biophys J 79:1687-1688. |
| 143. |
Baker, JE, I Brust-Mascher, LE LaConte, and DD Thomas. 2000. Mechanochemical coupling in muscle. Biophys J 78:2730. |
| 142. |
Karim, CB, LR Reddy, GW Hunter, YM Angell, G Barany, and DD Thomas. 2000. Chemical approach for evaluating role of the cysteine residues in pentameric phospholamban structure: effect on sarcoplasmic reticulum. Proceedings of the Sixteenth American Peptide Symposium. Kluwer Academic Publishers, Dordrecht, The Netherlands. |
| 141. |
Prochniewicz, E, and DD Thomas. 1999. Differences in structural dynamics of muscle and yeast actin accompany differences in functional interactions with myosin. Biochemistry 38:14860-14867. |
| 140. |
Baker, JE, LE LaConte, I Brust-Mascher, and DD Thomas. 1999. Mechanochemical coupling in spin-labeled, active, isometric muscle. Biophys J 77:2657-2664. |
| 139. |
Brust-Mascher, I, LE LaConte, JE Baker, and DD Thomas. 1999. Myosin light-chain domain rotates upon muscle activation but not ATP hydrolysis. Biochemistry 38:12607-12613. |
| 138. |
Karon, BS, JM Autry, Y Shi, CE Garnett, G Inesi, LR Jones, H Kutchai, and DD Thomas. 1999. Different anesthetic sensitivities of skeletal and cardiac isoforms of the Ca-ATPase. Biochemistry 38:9301-9307. |
| 137. |
Ramachandran, S, and DD Thomas. 1999. Rotational dynamics of the regulatory light chain in scallop muscle detected by time-resolved phosphorescence anisotropy. Biochemistry 38:9097-9104. |
| 136. |
Reddy, LG, Y Shi, H Kutchai, AG Filoteo, JT Penniston, and DD Thomas. 1999. An autoinhibitory peptide from the erythrocyte Ca-ATPase aggregates and inhibits both muscle Ca-ATPase isoforms. Biophys J 76:3058-3065. |
| 135. |
Li, M, LG Reddy, R Bennett, ND Silva, Jr., LR Jones, and DD Thomas. 1999. A fluorescence energy transfer method for analyzing protein oligomeric structure: application to phospholamban. Biophys J 76:2587-2599. |
| 134. |
Reddy, LG, JM Autry, LR Jones, and DD Thomas. 1999. Co-reconstitution of phospholamban mutants with the Ca-ATPase reveals dependence of inhibitory function on phospholamban structure. J Biol Chem 274:7649-7655. |
| 133. |
Reddy, LG, LR Jones, and DD Thomas. 1999. Depolymerization of phospholamban in the presence of calcium pump: a fluorescence energy transfer study. Biochemistry 38:3954-3962. |
| 132. |
Roopnarine, O, AG Szent-Gyorgyi, and DD Thomas. 1998. Microsecond rotational dynamics of spin-labeled myosin regulatory light chain induced by relaxation and contraction of scallop muscle. Biochemistry 37:14428-14436. |
| 131. |
Karim, CB, JD Stamm, J Karim, LR Jones, and DD Thomas. 1998. Cysteine reactivity and oligomeric structures of phospholamban and its mutants. Biochemistry 37:12074-12081. |
| 130. |
Thomas, DD, LG Reddy, CB Karim, M Li, RL Cornea, JM Autry, LR Jones, and J Stamm. 1998. Direct spectroscopic detection of molecular dynamics and interactions of the calcium pump and phospholamban. Ann N Y Acad Sci 853:186-194. |
| 129. |
Li, M, RL Cornea, JM Autry, LR Jones, and DD Thomas. 1998. Phosphorylation-induced structural change in phospholamban and its mutants, detected by intrinsic fluorescence. Biochemistry 37:7869-7877. |
| 128. |
Corrie, JET, JE Baker, EM Ostap, DD Thomas, and DR Trentham. 1998. Transient free radicals are formed during photolysis of the 1-(2-nitrophenyl) ethyl ester of adenosine triphosphate (caged ATP). J Photochem Photobiol:49-55. |
| 127. |
Kutchai, H, LM Geddis, LR Jones, and DD Thomas. 1998. Differential effects of general anesthetics on the quaternary structure of the Ca-ATPases of cardiac and skeletal sarcoplasmic reticulum. Biochemistry 37:2410-2421. |
| 126. |
Baker, JE, I Brust-Mascher, S Ramachandran, LE LaConte, and DD Thomas. 1998. A large and distinct rotation of the myosin light chain domain occurs upon muscle contraction. Proc Natl Acad Sci USA 95:2944-2949. |
| 125. |
Froehlich, JP, K Taniguchi, K Fendler, JE Mahaney, DD Thomas, and RW Albers. 1997. Complex kinetic behavior in the Na,K- and Ca-ATPases. Evidence for subunit-subunit interactions and energy conservation during catalysis. Ann N Y Acad Sci 834:280-296. |
| 124. |
Prochniewicz, E, and DD Thomas. 1997. Perturbations of functional interactions with myosin induce long-range allosteric and cooperative structural changes in actin. Biochemistry 36:12845-12853. |
| 123. |
Cornea, RL, LR Jones, JM Autry, and DD Thomas. 1997. Mutation and phosphorylation change the oligomeric structure of phospholamban in lipid bilayers. Biochemistry 36:2960-2967. |
| 122. |
Kleinschmidt, JH, JE Mahaney, DD Thomas, and D Marsh. 1997. Interaction of bee venom melittin with zwitterionic and negatively charged phospholipid bilayers: a spin-label electron spin resonance study. Biophys J 72:767-778. |
| 121. |
Shi, Y, BS Karon, H Kutchai, and DD Thomas. 1996. Phospholamban-dependent effects of C12E8 on calcium transport and molecular dynamics in cardiac sarcoplasmic reticulum. Biochemistry 35:13393-13399. |
| 120. |
Prochniewicz, E, Q Zhang, PA Janmey, and DD Thomas. 1996. Cooperativity in F-actin: binding of gelsolin at the barbed end affects structure and dynamics of the whole filament. J Mol Biol 260:756-766. |
| 119. |
Roopnarine, O, and DD Thomas. 1996. Orientation of intermediate nucleotide states of indane dione spin-labeled myosin heads in muscle fibers. Biophys J 70:2795-2806. |
| 118. |
Prochniewicz, E, Q Zhang, EC Howard, and DD Thomas. 1996. Microsecond rotational dynamics of actin: spectroscopic detection and theoretical simulation. J Mol Biol 255:446-457. |
| 117. |
Ostap, EM, VA Barnett, and DD Thomas. 1995. Resolution of three structural states of spin-labeled myosin in contracting muscle. Biophys J 69:177-188. |
| 116. |
Karon, BS, ER Nissen, J Voss, and DD Thomas. 1995. A continuous spectrophotometric assay for simultaneous measurement of calcium uptake and ATP hydrolysis in sarcoplasmic reticulum. Anal Biochem. 227:328-333. |
| 115. |
Voss, JC, JE Mahaney, LR Jones, and DD Thomas. 1995. Molecular dynamics in mouse atrial tumor sarcoplasmic reticulum. Biophys J 68:1787-1795. |
| 114. |
Roopnarine, O, and DD Thomas. 1995. Orientational dynamics of indane dione spin-labeled myosin heads in relaxed and contracting skeletal muscle fibers. Biophys J 68:1461-1471. |
| 113. |
Mahaney, JE, JP Froehlich, and DD Thomas. 1995. Conformational transitions of the sarcoplasmic reticulum Ca-ATPase studied by time-resolved EPR and quenched-flow kinetics. Biochemistry 34:4864-4879. |
| 112. |
Thomas, DD, S Ramachandran, O Roopnarine, DW Hayden, and EM Ostap. 1995. The mechanism of force generation in myosin: a disorder-to-order transition, coupled to internal structural changes. Biophys J 68:135S-141S. |
| 111. |
Karon, BS, LM Geddis, H Kutchai, and DD Thomas. 1995. Anesthetics alter the physical and functional properties of the Ca-ATPase in cardiac sarcoplasmic reticulum. Biophys J 68:936-945. |
| 110. |
Voss, JC, JE Mahaney, and DD Thomas. 1995. Mechanism of Ca-ATPase inhibition by melittin in skeletal sarcoplasmic reticulum. Biochemistry 34:930-939. |
| 109. |
Mersol, JV, H Kutchai, JE Mahaney, and DD Thomas. 1995. Self-association accompanies inhibition of Ca-ATPase by thapsigargin. Biophys J 68:208-215. |
| 108. |
Karon, BS, JE Mahaney, and DD Thomas. 1994. Halothane and cyclopiazonic acid modulate Ca-ATPase oligomeric state and function in sarcoplasmic reticulum. Biochemistry 33:13928-13937. |
| 107. |
Kutchai, H, JE Mahaney, LM Geddis, and DD Thomas. 1994. Hexanol and lidocaine affect the oligomeric state of the Ca-ATPase of sarcoplasmic reticulum. Biochemistry 33:13208-13222. |
| 106. |
Roopnarine, O, and DD Thomas. 1994. A spin label that binds to myosin heads in muscle fibers with its principal axis parallel to the fiber axis. Biophys J 67:1634-1645. |
| 105. |
Thomas, DD, and BS Karon. 1994 Temperature dependence of molecular dynamics and calcium ATPase activity in sarcoplasmic reticulum. The Temperature Adaptation of Biological Membranes. A.R. Cossins. London,, Portland Press. 1-12. |
| 104. |
Berger, CL, and DD Thomas. 1994. Rotational dynamics of actin-bound intermediates of the myosin adenosine triphosphatase cycle in myofibrils. Biophys J 67:250-261. |
| 103. |
Voss, J, LR Jones, and DD Thomas. 1994. The physical mechanism of calcium pump regulation in the heart. Biophys J 67:190-196. |
| 102. |
Thomas, DD 1994. Angular disorder of weak-binding actomyosin cross-bridges. Biophys J 66:1272-1273. |
| 101. |
Cornea, RL, and DD Thomas. 1994. Effects of membrane thickness on the molecular dynamics and enzymatic activity of reconstituted Ca-ATPase. Biochemistry 33:2912-2920. |
| 100. |
Naber, N, EM Ostap, DD Thomas, and R Cooke. 1993. Orientation and rotational dynamics of spin-labeled phalloidin bound to actin in muscle fibers. Proteins. 17:347-354. |
| 99. |
Birmachu, W, JC Voss, CF Louis, and DD Thomas. 1993. Protein and lipid rotational dynamics in cardiac and skeletal sarcoplasmic reticulum detected by EPR and phosphorescence anisotropy. Biochemistry 32:9445-9453. |
| 98. |
Karon, BS, and DD Thomas. 1993. Molecular mechanism of Ca-ATPase activation by halothane in sarcoplasmic reticulum. Biochemistry 32:7503-7511. |
| 97. |
Ostap, EM, HD White, and DD Thomas. 1993. Transient detection of spin-labeled myosin subfragment 1 conformational states during ATP hydrolysis. Biochemistry 32:6712-6720. |
| 96. |
Prochniewicz, E, E Katayama, T Yanagida, and DD Thomas. 1993. Cooperativity in F-actin: chemical modifications of actin monomers affect the functional interactions of myosin with unmodified monomers in the same actin filament. Biophys J 65:113-123. |
| 95. |
Thomas, DD. 1993. Blitz and blizzard: crossbridges and chaos. Biophys J 65:21-22. |
| 94. |
Roopnarine, O, K Hideg, and DD Thomas. 1993. Saturation transfer electron parametric resonance of an indane-dione spin-label. Calibration with hemoglobin and application to myosin rotational dynamics. Biophys J 64:1896-1907. |
| 93. |
Thomas, DD, and J Mahaney. 1993. The functional effects of protein and lipid dynamics in sarcoplasmic reticulum. Protein-Lipid Interactions. A. Watt, Elsevier Science Publishers B.V., North-Holland. 25:301-320. |
| 92. |
Thomas, DD, EM Ostap, CL Berger, SM Lewis, PG Fajer, and JE Mahaney. 1993. Transient EPR of spin-labeled proteins. EMR of Paramagnetic Molecules. LJ Berliner and J Reuben. New York, Plenum Press. 323-349. |
| 91. |
Berger, CL, and DD Thomas. 1993. Rotational dynamics of actin-bound myosin heads in active myofibrils. Biochemistry 32:3812-3821. |
| 90. |
Howard, EC, KM Lindahl, CF Polnaszek, and DD Thomas. 1993. Simulation of saturation transfer electron paramagnetic resonance spectra for rotational motion with restricted angular amplitude. Biophys J 64:581-593. |
| 89. |
Thomas, DD, BJ Gaffney, and OH Griffith. 1993. Harden M. McConnell: the science speaks for itself. Biophys J 64:581-593. |
| 88. |
Thomas, DD. 1993. Pollard to actomyosin: "Freeze! Don't even move your head". Biophys J 64:297-298. |
| 87. |
Mahaney, JE, J Kleinschmidt, D Marsh, and DD Thomas. 1992. Effects of melittin on lipid-protein interactions in sarcoplasmic reticulum membranes. Biophys J 63:1513-1522. |
| 86. |
Ostap, EM, T Yanagida, and DD Thomas. 1992. Orientational distribution of spin-labeled actin oriented by flow. Biophys J 63:966-975. |
| 85. |
Alessi, DR, JE Corrie, PG Fajer, MA Ferenczi, DD Thomas, IP Trayer, and DR Trentham. 1992. Synthesis and properties of a conformationally restricted spin-labeled analog of ATP and its interaction with myosin and skeletal muscle. Biochemistry 31:8043-8054. |
| 84. |
Lewis, SM, and DD Thomas. 1992. Resolved conformational states of spin-labeled Ca-ATPase during the enzymatic cycle. Biochemistry 31:7381-7389. |
| 83. |
Tanner, JW, DD Thomas, and YE Goldman. 1992. Transients in orientation of a fluorescent cross-bridge probe following photolysis of caged nucleotides in skeletal muscle fibres. J Mol Biol 223:185-203. |
| 82. |
Berger, CL, and DD Thomas. 1991. Rotational dynamics of actin-bound intermediates in the myosin ATPase cycle. Biochemistry 30:11036-11045. |
| 81. |
Fajer, PG, EA Fajer, M Schoenberg, and DD Thomas. 1991. Orientational disorder and motion of weakly attached cross-bridges. Biophys J 60:642-649. |
| 80. |
Lewis, SM, and DD Thomas. 1991. Microsecond rotational dynamics of spin-labeled Ca-ATPase during enzymatic cycling initiated by photolysis of caged ATP. Biochemistry 30:8331-8339. |
| 79. |
Voss, J, W Birmachu, DM Hussey, and DD Thomas. 1991. Effects of melittin on molecular dynamics and Ca-ATPase activity in sarcoplasmic reticulum membranes: time-resolved optical anisotropy. Biochemistry 30:7498-7506. |
| 78. |
Mahaney, JE, and DD Thomas. 1991. Effects of melittin on molecular dynamics and Ca-ATPase activity in sarcoplasmic reticulum membranes: electron paramagnetic resonance. Biochemistry 30:7171-7180. |
| 77. |
Ostap, EM, and DD Thomas. 1991. Rotational dynamics of spin-labeled F-actin during activation of myosin S1 ATPase using caged ATP. Biophys J 59:1235-1241. |
| 76. |
Harada, Y, K Sakurada, T Aoki, DD Thomas, and T Yanagida. 1990. Mechanochemical coupling in actomyosin energy transduction studied by in vitro movement assay. J Mol Biol 216:49-68. |
| 75. |
Stein, RA, RD Ludescher, PS Dahlberg, PG Fajer, RL Bennett, and DD Thomas. 1990. Time-resolved rotational dynamics of phosphorescent-labeled myosin heads in contracting muscle fibers. Biochemistry 29:10023-10031. |
| 74. |
Fajer, PG, EA Fajer, and DD Thomas. 1990. Myosin heads have a broad orientational distribution during isometric muscle contraction: time-resolved EPR studies using caged ATP. Proc Natl Acad Sci USA 87:5538-5542. |
| 73. |
Fajer, PG, EA Fajer, JJ Matta, and DD Thomas. 1990. Effect of ADP on the orientation of spin-labeled myosin heads in muscle fibers: a high-resolution study with deuterated spin labels. Biochemistry 29:5865-5871. |
| 72. |
Birmachu, W, and DD Thomas. 1990. Rotational dynamics of the Ca-ATPase in sarcoplasmic reticulum studied by time-resolved phosphorescence anisotropy. Biochemistry 29:3904-3914. |
| 71. |
Fajer, PG, RLH Bennett, CF Polnaszek, EA Fajer, and DD Thomas. 1990. General method for multiparameter fitting of high-resolution EPR spectra using a simplex algorithm. J. Magn. Res. 88:111-125. |
| 70. |
Lamche, HR, PT Silberstein, AC Knabe, DD Thomas, HS Jacob, and DE Hammerschmidt. 1990. Steroids decrease granulocyte membrane fluidity, while phorbol ester increases membrane fluidity. Studies using electron paramagnetic resonance. Inflammation. 14:61-70. |
| 69. |
Ervasti, JM, JR Mickelson, SM Lewis, DD Thomas, and CF Louis. 1989. An electron paramagnetic resonance study of skeletal muscle membrane fluidity in malignant hyperthermia. Biochim Biophys Acta. 986:70-74. |
| 68. |
Berger, CL, EC Svensson, and DD Thomas. 1989. Photolysis of a photolabile precursor of ATP (caged ATP) induces microsecond rotational motions of myosin heads bound to actin. Proc Natl Acad Sci USA 86:8753-8757. |
| 67. |
Squier, TC, and DD Thomas. 1989. Selective detection of the rotational dynamics of the protein-associated lipid hydrocarbon chains in sarcoplasmic reticulum membranes. Biophys J 56:735-748. |
| 66. |
Leder, RO, SL Helgerson, and DD Thomas. 1989. The transverse location of the retinal chromophore in the purple membrane by diffusion-enhanced energy transfer. J Mol Biol 209:683-701. |
| 65. |
Barnett, VA, and DD Thomas. 1989. Microsecond rotational motion of spin-labeled myosin heads during isometric muscle contraction. Saturation transfer electron paramagnetic resonance. Biophys J 56:517-523. |
| 64. |
Birmachu, W, FL Nisswandt, and DD Thomas. 1989. Conformational transitions in the calcium adenosinetriphosphatase studied by time-resolved fluorescence resonance energy transfer. Biochemistry 28:3940-3947. |
| 63. |
Squier, TC, DJ Bigelow, and DD Thomas. 1988. Lipid fluidity directly modulates the overall protein rotational mobility of the Ca-ATPase in sarcoplasmic reticulum. J Biol Chem 263:9178-9186. |
| 62. |
Squier, TC, and DD Thomas. 1988. Relationship between protein rotational dynamics and phosphoenzyme decomposition in the sarcoplasmic reticulum Ca-ATPase. J Biol Chem 263:9171-9177. |
| 61. |
Squier, TC, SE Hughes, and DD Thomas. 1988. Rotational dynamics and protein-protein interactions in the Ca-ATPase mechanism. J Biol Chem 263:9162-9170. |
| 60. |
Fajer, PG, EA Fajer, NJ Brunsvold, and DD Thomas. 1988. Effects of AMPPNP on the orientation and rotational dynamics of spin-labeled muscle cross-bridges. Biophys J 53:513-524. |
| 59. |
Ludescher, RD, and DD Thomas. 1988. Microsecond rotational dynamics of phosphorescent-labeled muscle cross-bridges. Biochemistry 27:3343-3351. |
| 58. |
Thomas, DD, PG Fajer, EA Fajer, NJ Brunsvold, and EC Svensson. 1988. EPR evidence for nucleotide effects on attached cross-bridges. Adv Exp Med Biol 226:241-253. |
| 57. |
Ludescher, RD, TM Eads, and DD Thomas. 1988. Ionic effects on the rotational dynamics of cross-bridges in myosin filaments, measured by triplet absorption anisotropy. J Mol Biol 200:89-99. |
| 56. |
Strasburg, GM, M Hogan, W Birmachu, DD Thomas, and CF Louis. 1988. Site-specific derivatives of wheat germ calmodulin. Interactions with troponin and sarcoplasmic reticulum. J Biol Chem 263:542-548. |
| 55. |
Thatte, HS, PB Addis, DD Thomas, DJ Bigelow, JR Mickelson, and CF Louis. 1987. Temperature-dependent abnormalities of the erythrocyte membrane in porcine malignant hyperthermia. Biochem Med Metab Biol 38:366-377. |
| 54. |
Ludescher, RD, TM Eads, and DD Thomas. 1987 Triplet anisotropy studies of restricted rotational motion in myosin monomers and filaments. Optical Studies of Muscle Cross-Bridges. R.J. Baskin and Y. Yeh. Boca raton, Florida, CRC Press. 33-65. |
| 53. |
Bigelow, DJ, and DD Thomas. 1987. Rotational dynamics of lipid and the Ca-ATPase in sarcoplasmic reticulum. The molecular basis of activation by diethyl ether. J Biol Chem 262:13449-13456. |
| 52. |
Thomas, DD. 1987. Detection of time-resolved microsecond molecular dynamics by optical and magnetic resonance spectroscopy. Structure, Dynamics, and Function of Biomolecules. A Ehrenberg, R Rigler, A Graslund and L Nilsson. Berlin, Springer Verlag. 140-144. |
| 51. |
Barnett, VA, and DD Thomas. 1987. Resolution of conformational states of spin-labeled myosin during steady-state ATP hydrolysis. Biochemistry 26:314-323. |
| 50. |
Thomas, DD. 1987. Spectroscopic probes of muscle cross-bridge rotation. Annu Rev Physiol. 49:691-709. |
| 49. |
Fajer, P, DD Thomas, JB Feix, and JS Hyde. 1986. Measurement of rotational molecular motion by time-resolved saturation transfer electron paramagnetic resonance. Biophys J 50:1195-1202. |
| 48. |
Svensson, EC, and DD Thomas. 1986. ATP induces microsecond rotational motions of myosin heads crosslinked to actin. Biophys J 50:999-1002. |
| 47. |
Lewis, SM, and DD Thomas. 1986. Effects of vanadate on the rotational dynamics of spin-labeled calcium adenosinetriphosphatase in sarcoplasmic reticulum membranes. Biochemistry 25:4615-4621. |
| 46. |
Thomas, DD. 1986. Molecular dynamics resolved. Nature. 321:539-540. |
| 45. |
Sommerville, LE, RM Resnick, DD Thomas, and GL Nelsestuen. 1986. Terbium probe of calcium-binding sites on the prothrombin-membrane complex. J Biol Chem 261:6222-6229. |
| 44. |
Squier, TC, and DD Thomas. 1986. Applications of new saturation transfer electron paramagnetic resonance methodology to the rotational dynamics of the Ca-ATPase in sarcoplasmic reticulum membranes. Biophys J 49:937-942. |
| 43. |
Squier, TC, and DD Thomas. 1986. Methodology for increased precision in saturation transfer electron paramagnetic resonance studies of rotational dynamics. Biophys J 49:921-935. |
| 42. |
Bigelow, DJ, TC Squier, and DD Thomas. 1986. Temperature dependence of rotational dynamics of protein and lipid in sarcoplasmic reticulum membranes. Biochemistry 25:194-202. |
| 41. |
Barnett, VA, PG Fajer, CF Polnaszek, and DD Thomas. 1986. High-resolution detection of muscle crossbridge orientation by electron paramagnetic resonance. Biophys J 49:144-147. |
| 40. |
Thomas, DD. 1986. Rotational diffusion of membrane proteins. Techniques for Analysis of Membrane Proteins. R Cherry and I Ragan. London, Chapman Hall. 377-431. |
| 39. |
Sommerville, LE, DD Thomas, and GL Nelsestuen. 1985. Tb3+ binding to bovine prothrombin and bovine prothrombin fragment 1. J Biol Chem 260:10444-10452. |
| 38. |
Thomas, DD, TM Eads, VA Barnett, KM Lindahl, DA Momont, and TC Squier. 1985 Saturation transfer EPR and triplet anisotropy: complementary techniques for the study of microsecond rotational dynamics. Spectroscopy and the Dynamics of Biological Systems. PM Bayley and RE Dale. London, Academic Press. 239‑257. |
| 37. |
Thomas, DD. 1985. Saturation transfer EPR studies of microsecond rotational motions in biological membranes. Enzymes of Biological Membranes. A. Martonosi. New York, Plenum Press. 287-312. |
| 36. |
Cooke, R, MS Crowder, CH Wendt, VA Barnett, and DD Thomas. 1984. Muscle cross-bridges: do they rotate? Adv Exp Med Biol 170:413-427. |
| 35. |
Thomas, DD, R Cooke, and VA Barnett. 1984. Comment on 'Geometrical constraints affecting crossbridge formation in insect flight muscle'. J Muscle Res Cell Motil 5:589-590. |
| 34. |
Barnett, VA, and DD Thomas. 1984. Saturation transfer electron paramagnetic resonance of spin-labeled muscle fibers. Dependence of myosin head rotational motion on sarcomere length. J Mol Biol 179:83-102. |
| 33. |
Eads, TM, DD Thomas, and RH Austin. 1984. Microsecond rotational motions of eosin-labeled myosin measured by time-resolved anisotropy of absorption and phosphorescence. J Mol Biol 179:55-81. |
| 32. |
Thomas, DD, R Cooke, and VA Barnett. 1983. Orientation and rotational mobility of spin-labeled myosin heads in insect flight muscle in rigor. J Muscle Res Cell Motil 4:367-378. |
| 31. |
Thomas, DD, CH Wendt, W Froncisz, and JS Hyde. 1983. Saturation transfer EPR spectroscopy on spin-labeled muscle fibers using a loop-gap resonator. Biophys J 43:131-135. |
| 30. |
Thomas, DD 1983. Rotational dynamics of spin-labeled muscle proteins. Ciba Found Symp 93:169-185. |
| 29. |
Thomas, DD. 1982 Saturation transfer EPR studies of rotational dynamics in membranes. Membranes and Transport. A. Martonosi. New York, Plenum Press. 135-139. |
| 28. |
Cooke, R, MS Crowder, and DD Thomas. 1982. Orientation of spin labels attached to cross-bridges in contracting muscle fibres. Nature 300:776-778. |
| 27. |
Stryer, L, DD Thomas, and CF Meares. 1982. Diffusion-enhanced fluorescence energy transfer. Annu Rev Biophys Bioeng 11:203-222. |
| 26. |
Stryer, L, DD Thomas, and WF Carlsen. 1982. Fluorescence energy transfer measurements of distances in rhodopsin and the purple membrane protein. Methods Enzymol 81:668-678. |
| 25. |
Thomas, DD, and L. Stryer. 1982. Transverse location of the retinal chromophore of rhodopsin in rod outer segment disc membranes. J Mol Biol 154:145-157. |
| 24. |
Thomas, DD, DJ Bigelow, TC Squier, and C Hidalgo. 1982. Rotational dynamics of protein and boundary lipid in sarcoplasmic reticulum membrane. Biophys J 37:217-225. |
| 23. |
Quintanilha, AT, DD Thomas, and MS Swanson. 1982. Protein-lipid interactions within purified and reconstituted cytochrome c reductase and oxidase. Biophys J 37:68-69. |
| 22. |
Thomas, DD. 1981. Orientation and rotational dynamics of spin-labeled muscle crossbridges. Protein Dynamics and Energy Transduction. S. Ishiwata. 523‑542. |
| 21. |
Hyde, JS, and DD Thomas. 1980. Saturation transfer spectroscopy. Ann Rev Phys Chem. 31:293-317. |
| 20. |
Thomas, DD, and R Cooke. 1980. Orientation of spin-labeled myosin heads in glycerinated muscle fibers. Biophys J 32:891-906. |
| 19. |
Thomas, DD, S Ishiwata, JC Seidel, and J Gergely. 1980. Sub-millisecond rotational dynamics of spin-labeled myosin heads in myofibrils. Biophys J 32:873-889. |
| 18. |
Swanson, MS, AT Quintanilha, and DD Thomas. 1980. Protein rotational mobility and lipid fluidity of purified and reconstituted cytochrome c oxidase. J Biol Chem 255:7494-7502. |
| 17. |
Thomas, DD, JC Seidel, and J Gergely. 1979. Rotational dynamics of spin-labeled F-actin in the sub-millisecond time range. J Mol Biol 132:257-273. |
| 16. |
Thomas, DD, WF Carlsen, and L Stryer. 1978. Fluorescence energy transfer in the rapid-diffusion limit. Proc Natl Acad Sci U S A 75:5746-5750. |
| 15. |
Thomas, DD 1978. Large-scale rotational motions of proteins detected by electron paramagnetic resonance and fluorescence. Biophys J 24:439-462. |
| 14. |
Thomas, DD, and C Hidalgo. 1978. Rotational motion of the sarcoplasmic reticulum Ca2+-ATPase. Proc Natl Acad Sci U S A 75:5488-5492. |
| 13. |
Hidalgo, C, DD Thomas, and N Ikemoto. 1978. Effect of the lipid environment on protein motion and enzymatic activity of sarcoplasmic reticulum calcium ATPase. J Biol Chem 253:6879-6887. |
| 12. |
Devaux, PF, A Baroin, A Bienvenue, E Favre, A Rousselet, and DD Thomas. 1977. Rotational diffusion of various membrane bound proteins by saturation transfer EPR spectroscopy. Membrane Bioenergetics. L. Packer, et al., editors. Academic Press, New York. 47-54. |
| 11. |
Hidalgo, C, and DD Thomas. 1977. Heterogeneity of SH groups in sarcoplasmic reticulum. Biochem Biophys Res Commun 78:1175-1182. |
| 10. |
Baroin, A, DD Thomas, B Osborne, and PF Devaux. 1977. Saturation transfer electron paramagnetic resonance on membrane-bound proteins. I-Rotational diffusion of rhodopsin in the visual receptor membrane. Biochem Biophys Res Commun 78:442-447. |
| 9. |
Thomas, DD 1977. Saturation transfer EPR. Trends Biochem Sci 2:N62-N63. |
| 8. |
Thomas, DD, JC Seidel, and J Gergely. 1976. Molecular motions and the mechanism of muscle contraction and its regulation. Contractile Systems in Nonmuscle Cells. S.V. Perry, et al., editors. Elsevier, North-Holland Biomedical Press. 13-21. |
| 7. |
Thomas, DD, LR Dalton, and JS Hyde. 1976. Rotational diffusion studied by passage saturation transfer electron paramagnetic resonance. J Chem Phys 65:3006-3024. |
| 6. |
Thomas, DD 1976. Rotational dynamics in spin-labeled biomacromolecular assemblies: saturation transfer electron paramagnetic resonance. Ph. D. Thesis. Stanford University. |
| 5. |
Thomas, DD, JC Seidel, J Gergely, and JS Hyde. 1975. The quantitative measurement of rotational motion of the subfragment-1 region of myosin by saturation transfer EPR spectroscopy. J Supramol Struct 3:376-390. |
| 4. |
Thomas, DD, JC Seidel, JS Hyde, and J Gergely. 1975. Motion of subfragment-1 in myosin and its supramolecular complexes: saturation transfer electron paramagnetic resonance. Proc Natl Acad Sci U S A 72:1729-1733. |
| 3. |
Thomas, DD, and HM McConnell. 1974. Calculation of paramagnetic resonance spectra sensitive to very slow rotational motion. Chem Phys Lett 25:470-475. |
| 2. |
Hyde, JS, and DD Thomas. 1973. New EPR methods for the study of very slow motion: application to spin-labeled hemoglobin. Ann N Y Acad Sci 222:680-692. |
| 1. |
Loew, GH, and DD Thomas. 1972. Molecular orbital calculations of the catalytic effect of lysozyme. I. Glu 35 as general acid catalyst. J Theor Biol 36:89-104. |
